pgx-main from prod added
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CYP2D6 Star Allele Calling with StellarPGx
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Initially computed CN = 2
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Sample core variants:
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42126611~C>G~1/1;42127941~G>A~0/1;42128945~C>T~0/1;42130692~G>A~0/1;42130761~C>T~0/1
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Candidate alleles:
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['35.v1_4.v2']
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Result:
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*35/*4
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Activity score:
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1.0
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Metaboliser status:
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Intermediate metaboliser (IM)
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--------------------------------------------
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CYP2D6 Star Allele Calling with StellarPGx
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--------------------------------------------
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Initially computed CN = 3
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Sample core variants:
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42126611~C>G~0/1;42127526~C>T~0/1;42128241~CT>C~0/1;42130692~G>A~0/1
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Candidate alleles:
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[10.v1_139.v1]
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Result:
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Possible novel allele or suballele present: interpret with caution; experimental validation and expert review through PharmVar is recommended
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Likely background alleles:
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[*10/*139]
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Activity score:
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Indeterminate
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Metaboliser status:
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Indeterminate
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--------------------------------------------
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CYP2D6 Star Allele Calling with StellarPGx
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--------------------------------------------
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Initially computed CN = 3
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Sample core variants:
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42126611~C>G~1/1;42127941~G>A~1/1
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Candidate alleles:
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['2.v1_2.v1']
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Result:
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*2/*2x2
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Activity score:
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3.0
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Metaboliser status:
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Ultrarapid metaboliser (UM)
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@@ -0,0 +1,22 @@
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--------------------------------------------
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CYP2D6 Star Allele Calling with StellarPGx
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--------------------------------------------
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Initially computed CN = 2
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Sample core variants:
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42126611~C>G~0/1;42127941~G>A~0/1;42129770~G>A~0/1;42130654~C>CA~0/1
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Candidate alleles:
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['15.v1_17.v1']
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Result:
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*15/*17
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Activity score:
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0.5
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Metaboliser status:
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Intermediate metaboliser (IM)
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@@ -0,0 +1,22 @@
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--------------------------------------------
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CYP2D6 Star Allele Calling with StellarPGx
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--------------------------------------------
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Initially computed CN = 2
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Sample core variants:
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42126611~C>G~1/1;42127941~G>A~0/1;42128945~C>T~0/1;42129809~T>C~0/1;42129819~G>T~0/1;42130692~G>A~0/1
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Candidate alleles:
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['2.v1_4.v1']
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Result:
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*2/*4
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Activity score:
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1.0
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Metaboliser status:
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Intermediate metaboliser (IM)
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