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pgx-main from prod added

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Darren Wight
2025-08-18 12:06:58 +02:00
parent fcb0e9aa4c
commit fe48df8676
984 changed files with 878657 additions and 0 deletions
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pgx-main/pgx_fulgent_panel.tsv Normal file
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gene variants focused_panel covered
BCHE rs1803274 True True
BCHE rs1799807 True True
CYP2B6 *1 True True
CYP2B6 *4 True True
CYP2B6 *5 True True
CYP2B6 *6 True True
CYP2B6 *7 True True
CYP2B6 *8 True True
CYP2B6 *9 True True
CYP2B6 *13 True True
CYP2B6 *16 True True
CYP2B6 *18 True True
CYP2B6 *22 True True
CYP2C19 *1 True True
CYP2C19 *2 True True
CYP2C19 *3 True True
CYP2C19 *4 True True
CYP2C19 *5 True True
CYP2C19 *6 True True
CYP2C19 *7 True True
CYP2C19 *8 True True
CYP2C19 *9 True True
CYP2C19 *10 True True
CYP2C19 *17 True True
CYP2C19 *35 True True
CYP2C9 *1 True True
CYP2C9 *2 True True
CYP2C9 *3 True True
CYP2C9 *5 True True
CYP2C9 *6 True True
CYP2C9 *8 True True
CYP2C9 *11 True True
CYP2D6 *1 True True
CYP2D6 *1x2 True True
CYP2D6 *2 True True
CYP2D6 *2x2 True True
CYP2D6 *3 True True
CYP2D6 *4 True True
CYP2D6 *4x2 True True
CYP2D6 *5 True True
CYP2D6 *6 True True
CYP2D6 *7 True True
CYP2D6 *8 True True
CYP2D6 *9 True True
CYP2D6 *10 True True
CYP2D6 *10x2 True True
CYP2D6 *11 True True
CYP2D6 *12 True True
CYP2D6 *14 True True
CYP2D6 *15 True True
CYP2D6 *17 True True
CYP2D6 *19 True True
CYP2D6 *20 True True
CYP2D6 *21 True True
CYP2D6 *29 True True
CYP2D6 *31 True True
CYP2D6 *35 True True
CYP2D6 *36 True True
CYP2D6 *36x2 True True
CYP2D6 *40 True True
CYP2D6 *41 True True
CYP2D6 *45 True True
CYP2D6 *46 True True
CYP3A5 *1 True True
CYP3A5 *3 True True
CYP3A5 *6 True True
CYP3A5 *7 True True
CYP4F2 rs2108622 True True
DPYD *1 True True
DPYD *2A True False
DPYD *13 True True
DPYD rs67376798 True True
G6PD rs5030868 True True
G6PD rs1050829 True True
G6PD rs1050828 True True
HLA-B *15:02 True True
HLA-B *57:01 True True
IFNL4 rs12979860 True True
NAT2 *4 True False
NAT2 *5 True True
NAT2 *6 True True
NAT2 *7 True True
NAT2 *14 True True
RYRI rs118192177 True True
RYRI rs118192176 True True
RYRI rs193922762 True True
RYRI rs118192175 True True
RYRI rs193922770 True True
RYRI rs118192124 True True
RYRI rs193922832 True True
RYRI rs193922809 True True
RYRI rs193922802 True True
RYRI rs193922816 True True
RYRI rs112563513 True True
RYRI rs193922748 True True
RYRI rs118192161 True True
RYRI rs121918595 True True
RYRI rs121918596 True True
RYRI rs28933397 True True
RYRI rs193922753 True True
RYRI rs118192178 True True
RYRI rs28933396 True True
RYRI rs121918593 True True
RYRI rs193922843 True True
RYRI rs1801086 True True
RYRI rs144336148 True True
RYRI rs118192162 True True
RYRI rs193922768 True True
RYRI rs193922807 True True
RYRI rs118192116 True True
RYRI rs193922747 True True
RYRI rs118192122 True True
RYRI rs121918592 True True
RYRI rs118192168 True True
RYRI rs121918594 True True
RYRI rs118192172 True True
RYRI rs118192170 True True
RYRI rs111888148 True True
RYRI rs193922878 True True
RYRI rs193922876 True True
RYRI rs193922764 True True
RYRI rs193922772 True True
RYRI rs118192167 True True
RYRI rs193922818 True True
RYRI rs193922803 True True
RYRI rs63749869 True True
RYRI rs118192163 True True
NUDT15 *1 True True
NUDT15 *2 True True
NUDT15 *3 True True
NUDT15 *6 True True
NUDT15 *9 True True
SLCO1B1 rs4149056 True True
TPMT *1 True True
TPMT *2 True True
TPMT *3A True True
TPMT *3B True True
TPMT *3C True True
TPMT *4 True True
UGT1A1 *6 True True
UGT1A1 *80 True True
VKORC1 rs9923231 True True
ABCB1 rs2032582 False True
ABCB1 rs1045642 False True
ACE rs1799752 False True
ACE rs4343 False True
ANKK1 rs1800497 False True
APOE rs7412 False True
ATM rs11212617 False False
CES1 rs71647871 False True
COMT rs4680 False True
COMT rs13306278 False True
CYP2C8 rs10509681 False True
CYP3A4 rs2740574 False True
CYP3A4 rs2242480 False True
DRD2 rs1799978 False True
ERCC1 rs3212986 False True
ERCC1 rs11615 False True
F2 rs1799963 False True
F5 rs6025 False True
GGCX rs11676382 False True
GRIK4 rs1954787 False True
GSTP1 rs1695 False True
HTR1A rs6295 False True
HTR2A rs7997012 False True
HTR2C rs1414334 False True
HTR2C rs3813929 False True
ITPA rs1127354 False True
ITPA rs7270101 False True
KIF6 rs20455 False True
MTHFR rs1801133 False True
NQO1 rs1800566 False True
OPRM1 rs1799971 False True
UGT1A4 rs2011425 False True
XRCC1 rs25487 False True
1 gene variants focused_panel covered
2 BCHE rs1803274 True True
3 BCHE rs1799807 True True
4 CYP2B6 *1 True True
5 CYP2B6 *4 True True
6 CYP2B6 *5 True True
7 CYP2B6 *6 True True
8 CYP2B6 *7 True True
9 CYP2B6 *8 True True
10 CYP2B6 *9 True True
11 CYP2B6 *13 True True
12 CYP2B6 *16 True True
13 CYP2B6 *18 True True
14 CYP2B6 *22 True True
15 CYP2C19 *1 True True
16 CYP2C19 *2 True True
17 CYP2C19 *3 True True
18 CYP2C19 *4 True True
19 CYP2C19 *5 True True
20 CYP2C19 *6 True True
21 CYP2C19 *7 True True
22 CYP2C19 *8 True True
23 CYP2C19 *9 True True
24 CYP2C19 *10 True True
25 CYP2C19 *17 True True
26 CYP2C19 *35 True True
27 CYP2C9 *1 True True
28 CYP2C9 *2 True True
29 CYP2C9 *3 True True
30 CYP2C9 *5 True True
31 CYP2C9 *6 True True
32 CYP2C9 *8 True True
33 CYP2C9 *11 True True
34 CYP2D6 *1 True True
35 CYP2D6 *1x2 True True
36 CYP2D6 *2 True True
37 CYP2D6 *2x2 True True
38 CYP2D6 *3 True True
39 CYP2D6 *4 True True
40 CYP2D6 *4x2 True True
41 CYP2D6 *5 True True
42 CYP2D6 *6 True True
43 CYP2D6 *7 True True
44 CYP2D6 *8 True True
45 CYP2D6 *9 True True
46 CYP2D6 *10 True True
47 CYP2D6 *10x2 True True
48 CYP2D6 *11 True True
49 CYP2D6 *12 True True
50 CYP2D6 *14 True True
51 CYP2D6 *15 True True
52 CYP2D6 *17 True True
53 CYP2D6 *19 True True
54 CYP2D6 *20 True True
55 CYP2D6 *21 True True
56 CYP2D6 *29 True True
57 CYP2D6 *31 True True
58 CYP2D6 *35 True True
59 CYP2D6 *36 True True
60 CYP2D6 *36x2 True True
61 CYP2D6 *40 True True
62 CYP2D6 *41 True True
63 CYP2D6 *45 True True
64 CYP2D6 *46 True True
65 CYP3A5 *1 True True
66 CYP3A5 *3 True True
67 CYP3A5 *6 True True
68 CYP3A5 *7 True True
69 CYP4F2 rs2108622 True True
70 DPYD *1 True True
71 DPYD *2A True False
72 DPYD *13 True True
73 DPYD rs67376798 True True
74 G6PD rs5030868 True True
75 G6PD rs1050829 True True
76 G6PD rs1050828 True True
77 HLA-B *15:02 True True
78 HLA-B *57:01 True True
79 IFNL4 rs12979860 True True
80 NAT2 *4 True False
81 NAT2 *5 True True
82 NAT2 *6 True True
83 NAT2 *7 True True
84 NAT2 *14 True True
85 RYRI rs118192177 True True
86 RYRI rs118192176 True True
87 RYRI rs193922762 True True
88 RYRI rs118192175 True True
89 RYRI rs193922770 True True
90 RYRI rs118192124 True True
91 RYRI rs193922832 True True
92 RYRI rs193922809 True True
93 RYRI rs193922802 True True
94 RYRI rs193922816 True True
95 RYRI rs112563513 True True
96 RYRI rs193922748 True True
97 RYRI rs118192161 True True
98 RYRI rs121918595 True True
99 RYRI rs121918596 True True
100 RYRI rs28933397 True True
101 RYRI rs193922753 True True
102 RYRI rs118192178 True True
103 RYRI rs28933396 True True
104 RYRI rs121918593 True True
105 RYRI rs193922843 True True
106 RYRI rs1801086 True True
107 RYRI rs144336148 True True
108 RYRI rs118192162 True True
109 RYRI rs193922768 True True
110 RYRI rs193922807 True True
111 RYRI rs118192116 True True
112 RYRI rs193922747 True True
113 RYRI rs118192122 True True
114 RYRI rs121918592 True True
115 RYRI rs118192168 True True
116 RYRI rs121918594 True True
117 RYRI rs118192172 True True
118 RYRI rs118192170 True True
119 RYRI rs111888148 True True
120 RYRI rs193922878 True True
121 RYRI rs193922876 True True
122 RYRI rs193922764 True True
123 RYRI rs193922772 True True
124 RYRI rs118192167 True True
125 RYRI rs193922818 True True
126 RYRI rs193922803 True True
127 RYRI rs63749869 True True
128 RYRI rs118192163 True True
129 NUDT15 *1 True True
130 NUDT15 *2 True True
131 NUDT15 *3 True True
132 NUDT15 *6 True True
133 NUDT15 *9 True True
134 SLCO1B1 rs4149056 True True
135 TPMT *1 True True
136 TPMT *2 True True
137 TPMT *3A True True
138 TPMT *3B True True
139 TPMT *3C True True
140 TPMT *4 True True
141 UGT1A1 *6 True True
142 UGT1A1 *80 True True
143 VKORC1 rs9923231 True True
144 ABCB1 rs2032582 False True
145 ABCB1 rs1045642 False True
146 ACE rs1799752 False True
147 ACE rs4343 False True
148 ANKK1 rs1800497 False True
149 APOE rs7412 False True
150 ATM rs11212617 False False
151 CES1 rs71647871 False True
152 COMT rs4680 False True
153 COMT rs13306278 False True
154 CYP2C8 rs10509681 False True
155 CYP3A4 rs2740574 False True
156 CYP3A4 rs2242480 False True
157 DRD2 rs1799978 False True
158 ERCC1 rs3212986 False True
159 ERCC1 rs11615 False True
160 F2 rs1799963 False True
161 F5 rs6025 False True
162 GGCX rs11676382 False True
163 GRIK4 rs1954787 False True
164 GSTP1 rs1695 False True
165 HTR1A rs6295 False True
166 HTR2A rs7997012 False True
167 HTR2C rs1414334 False True
168 HTR2C rs3813929 False True
169 ITPA rs1127354 False True
170 ITPA rs7270101 False True
171 KIF6 rs20455 False True
172 MTHFR rs1801133 False True
173 NQO1 rs1800566 False True
174 OPRM1 rs1799971 False True
175 UGT1A4 rs2011425 False True
176 XRCC1 rs25487 False True