darren/reproduce_setup
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

pgx-main from prod added

Browse Source
This commit is contained in:
Darren Wight
2025-08-18 12:06:58 +02:00
parent fcb0e9aa4c
commit fe48df8676
984 changed files with 878657 additions and 0 deletions
Download Patch File Download Diff File Expand all files Collapse all files

105
pgx-main/database/cyp2c8/hg38/diplo_db_debugged2.dbs Normal file
View File

@@ -0,0 +1,105 @@
10.v1_10.v1 95042890~C>A~1/1 95042890~C>A
10.v1_11.v1 95042890~C>A~0/1;95045951~C>A~0/1 95042890~C>A;95045951~C>A
10.v1_12.v1 95037216~TCAA>T~0/1;95042890~C>A~0/1 95037216~TCAA>T;95042890~C>A
10.v1_13.v1 95042890~C>A~0/1;95058485~A>C~0/1 95042890~C>A;95058485~A>C
10.v1_14.v1 95042890~C>A~0/1;95058442~C>G~0/1 95042890~C>A;95058442~C>G
10.v1_2.v1 95042890~C>A~0/1;95058349~T>A~0/1 95037104~G>A;95042890~C>A;95058349~T>A
10.v1_3.v1 95038992~T>C~0/1;95042890~C>A~0/1;95067273~C>T~0/1 95037104~G>A;95038992~T>C;95042841~A>T;95042890~C>A;95067273~C>T;95067393~C>T;95067728~G>A
10.v1_4.v1 95042890~C>A~0/1;95058362~G>C~0/1 95042890~C>A;95058362~G>C
10.v1_5.v1 95042890~C>A~0/1;95067213~GT>G~0/1 95042890~C>A;95067213~GT>G
10.v1_6.v1 95042890~C>A~0/1;95064931~C>T~0/1 95042890~C>A;95064931~C>T
10.v1_7.v1 95042890~C>A~0/1;95064886~G>A~0/1 95042890~C>A;95064886~G>A
10.v1_8.v1 95042890~C>A~0/1;95064886~G>C~0/1 95042890~C>A;95064886~G>C
10.v1_9.v1 95042890~C>A~0/1;95058414~T>C~0/1 95042890~C>A;95058414~T>C
11.v1_11.v1 95045951~C>A~1/1 95045951~C>A
11.v1_12.v1 95037216~TCAA>T~0/1;95045951~C>A~0/1 95037216~TCAA>T;95045951~C>A
11.v1_13.v1 95045951~C>A~0/1;95058485~A>C~0/1 95045951~C>A;95058485~A>C
11.v1_14.v1 95045951~C>A~0/1;95058442~C>G~0/1 95045951~C>A;95058442~C>G
11.v1_2.v1 95045951~C>A~0/1;95058349~T>A~0/1 95037104~G>A;95045951~C>A;95058349~T>A
11.v1_3.v1 95038992~T>C~0/1;95045951~C>A~0/1;95067273~C>T~0/1 95037104~G>A;95038992~T>C;95042841~A>T;95045951~C>A;95067273~C>T;95067393~C>T;95067728~G>A
11.v1_4.v1 95045951~C>A~0/1;95058362~G>C~0/1 95045951~C>A;95058362~G>C
11.v1_5.v1 95045951~C>A~0/1;95067213~GT>G~0/1 95045951~C>A;95067213~GT>G
11.v1_6.v1 95045951~C>A~0/1;95064931~C>T~0/1 95045951~C>A;95064931~C>T
11.v1_7.v1 95045951~C>A~0/1;95064886~G>A~0/1 95045951~C>A;95064886~G>A
11.v1_8.v1 95045951~C>A~0/1;95064886~G>C~0/1 95045951~C>A;95064886~G>C
11.v1_9.v1 95045951~C>A~0/1;95058414~T>C~0/1 95045951~C>A;95058414~T>C
12.v1_12.v1 95037216~TCAA>T~1/1 95037216~TCAA>T
12.v1_13.v1 95037216~TCAA>T~0/1;95058485~A>C~0/1 95037216~TCAA>T;95058485~A>C
12.v1_14.v1 95037216~TCAA>T~0/1;95058442~C>G~0/1 95037216~TCAA>T;95058442~C>G
12.v1_2.v1 95037216~TCAA>T~0/1;95058349~T>A~0/1 95037104~G>A;95037216~TCAA>T;95058349~T>A
12.v1_3.v1 95037216~TCAA>T~0/1;95038992~T>C~0/1;95067273~C>T~0/1 95037104~G>A;95037216~TCAA>T;95038992~T>C;95042841~A>T;95067273~C>T;95067393~C>T;95067728~G>A
12.v1_4.v1 95037216~TCAA>T~0/1;95058362~G>C~0/1 95037216~TCAA>T;95058362~G>C
12.v1_5.v1 95037216~TCAA>T~0/1;95067213~GT>G~0/1 95037216~TCAA>T;95067213~GT>G
12.v1_6.v1 95037216~TCAA>T~0/1;95064931~C>T~0/1 95037216~TCAA>T;95064931~C>T
12.v1_7.v1 95037216~TCAA>T~0/1;95064886~G>A~0/1 95037216~TCAA>T;95064886~G>A
12.v1_8.v1 95037216~TCAA>T~0/1;95064886~G>C~0/1 95037216~TCAA>T;95064886~G>C
12.v1_9.v1 95037216~TCAA>T~0/1;95058414~T>C~0/1 95037216~TCAA>T;95058414~T>C
13.v1_13.v1 95058485~A>C~1/1 95058485~A>C
13.v1_14.v1 95058442~C>G~0/1;95058485~A>C~0/1 95058442~C>G;95058485~A>C
13.v1_2.v1 95058349~T>A~0/1;95058485~A>C~0/1 95037104~G>A;95058349~T>A;95058485~A>C
13.v1_3.v1 95038992~T>C~0/1;95058485~A>C~0/1;95067273~C>T~0/1 95037104~G>A;95038992~T>C;95042841~A>T;95058485~A>C;95067273~C>T;95067393~C>T;95067728~G>A
13.v1_4.v1 95058362~G>C~0/1;95058485~A>C~0/1 95058362~G>C;95058485~A>C
13.v1_5.v1 95058485~A>C~0/1;95067213~GT>G~0/1 95058485~A>C;95067213~GT>G
13.v1_6.v1 95058485~A>C~0/1;95064931~C>T~0/1 95058485~A>C;95064931~C>T
13.v1_7.v1 95058485~A>C~0/1;95064886~G>A~0/1 95058485~A>C;95064886~G>A
13.v1_8.v1 95058485~A>C~0/1;95064886~G>C~0/1 95058485~A>C;95064886~G>C
13.v1_9.v1 95058414~T>C~0/1;95058485~A>C~0/1 95058414~T>C;95058485~A>C
14.v1_14.v1 95058442~C>G~1/1 95058442~C>G
14.v1_2.v1 95058349~T>A~0/1;95058442~C>G~0/1 95037104~G>A;95058349~T>A;95058442~C>G
14.v1_3.v1 95038992~T>C~0/1;95058442~C>G~0/1;95067273~C>T~0/1 95037104~G>A;95038992~T>C;95042841~A>T;95058442~C>G;95067273~C>T;95067393~C>T;95067728~G>A
14.v1_4.v1 95058362~G>C~0/1;95058442~C>G~0/1 95058362~G>C;95058442~C>G
14.v1_5.v1 95058442~C>G~0/1;95067213~GT>G~0/1 95058442~C>G;95067213~GT>G
14.v1_6.v1 95058442~C>G~0/1;95064931~C>T~0/1 95058442~C>G;95064931~C>T
14.v1_7.v1 95058442~C>G~0/1;95064886~G>A~0/1 95058442~C>G;95064886~G>A
14.v1_8.v1 95058442~C>G~0/1;95064886~G>C~0/1 95058442~C>G;95064886~G>C
14.v1_9.v1 95058414~T>C~0/1;95058442~C>G~0/1 95058414~T>C;95058442~C>G
1.v1_10.v1 95042890~C>A~0/1 95042890~C>A;95069673~G>T;95069772~A>C
1.v1_11.v1 95045951~C>A~0/1 95045951~C>A;95069673~G>T;95069772~A>C
1.v1_12.v1 95037216~TCAA>T~0/1 95037216~TCAA>T;95069673~G>T;95069772~A>C
1.v1_13.v1 95058485~A>C~0/1 95058485~A>C;95069673~G>T;95069772~A>C
1.v1_14.v1 95058442~C>G~0/1 95058442~C>G;95069673~G>T;95069772~A>C
1.v1_1.v1 ref_diplo 95069673~G>T;95069772~A>C
1.v1_2.v1 95058349~T>A~0/1 95037104~G>A;95058349~T>A;95069673~G>T;95069772~A>C
1.v1_3.v1 95038992~T>C~0/1;95067273~C>T~0/1 95037104~G>A;95038992~T>C;95042841~A>T;95067273~C>T;95067393~C>T;95067728~G>A;95069673~G>T;95069772~A>C
1.v1_4.v1 95058362~G>C~0/1 95058362~G>C;95069673~G>T;95069772~A>C
1.v1_5.v1 95067213~GT>G~0/1 95067213~GT>G;95069673~G>T;95069772~A>C
1.v1_6.v1 95064931~C>T~0/1 95064931~C>T;95069673~G>T;95069772~A>C
1.v1_7.v1 95064886~G>A~0/1 95064886~G>A;95069673~G>T;95069772~A>C
1.v1_8.v1 95064886~G>C~0/1 95064886~G>C;95069673~G>T;95069772~A>C
1.v1_9.v1 95058414~T>C~0/1 95058414~T>C;95069673~G>T;95069772~A>C
2.v1_2.v1 95058349~T>A~1/1 95037104~G>A;95058349~T>A
2.v1_3.v1 95038992~T>C~0/1;95058349~T>A~0/1;95067273~C>T~0/1 95037104~G>A;95038992~T>C;95042841~A>T;95058349~T>A;95067273~C>T;95067393~C>T;95067728~G>A
2.v1_4.v1 95058349~T>A~0/1;95058362~G>C~0/1 95037104~G>A;95058349~T>A;95058362~G>C
2.v1_5.v1 95058349~T>A~0/1;95067213~GT>G~0/1 95037104~G>A;95058349~T>A;95067213~GT>G
2.v1_6.v1 95058349~T>A~0/1;95064931~C>T~0/1 95037104~G>A;95058349~T>A;95064931~C>T
2.v1_7.v1 95058349~T>A~0/1;95064886~G>A~0/1 95037104~G>A;95058349~T>A;95064886~G>A
2.v1_8.v1 95058349~T>A~0/1;95064886~G>C~0/1 95037104~G>A;95058349~T>A;95064886~G>C
2.v1_9.v1 95058349~T>A~0/1;95058414~T>C~0/1 95037104~G>A;95058349~T>A;95058414~T>C
3.v1_3.v1 95038992~T>C~1/1;95067273~C>T~1/1 95037104~G>A;95038992~T>C;95042841~A>T;95067273~C>T;95067393~C>T;95067728~G>A
3.v1_4.v1 95038992~T>C~0/1;95058362~G>C~0/1;95067273~C>T~0/1 95037104~G>A;95038992~T>C;95042841~A>T;95058362~G>C;95067273~C>T;95067393~C>T;95067728~G>A
3.v1_5.v1 95038992~T>C~0/1;95067213~GT>G~0/1;95067273~C>T~0/1 95037104~G>A;95038992~T>C;95042841~A>T;95067213~GT>G;95067273~C>T;95067393~C>T;95067728~G>A
3.v1_6.v1 95038992~T>C~0/1;95064931~C>T~0/1;95067273~C>T~0/1 95037104~G>A;95038992~T>C;95042841~A>T;95064931~C>T;95067273~C>T;95067393~C>T;95067728~G>A
3.v1_7.v1 95038992~T>C~0/1;95064886~G>A~0/1;95067273~C>T~0/1 95037104~G>A;95038992~T>C;95042841~A>T;95064886~G>A;95067273~C>T;95067393~C>T;95067728~G>A
3.v1_8.v1 95038992~T>C~0/1;95064886~G>C~0/1;95067273~C>T~0/1 95037104~G>A;95038992~T>C;95042841~A>T;95064886~G>C;95067273~C>T;95067393~C>T;95067728~G>A
3.v1_9.v1 95038992~T>C~0/1;95058414~T>C~0/1;95067273~C>T~0/1 95037104~G>A;95038992~T>C;95042841~A>T;95058414~T>C;95067273~C>T;95067393~C>T;95067728~G>A
4.v1_4.v1 95058362~G>C~1/1 95058362~G>C
4.v1_5.v1 95058362~G>C~0/1;95067213~GT>G~0/1 95058362~G>C;95067213~GT>G
4.v1_6.v1 95058362~G>C~0/1;95064931~C>T~0/1 95058362~G>C;95064931~C>T
4.v1_7.v1 95058362~G>C~0/1;95064886~G>A~0/1 95058362~G>C;95064886~G>A
4.v1_8.v1 95058362~G>C~0/1;95064886~G>C~0/1 95058362~G>C;95064886~G>C
4.v1_9.v1 95058362~G>C~0/1;95058414~T>C~0/1 95058362~G>C;95058414~T>C
5.v1_5.v1 95067213~GT>G~1/1 95067213~GT>G
5.v1_6.v1 95064931~C>T~0/1;95067213~GT>G~0/1 95064931~C>T;95067213~GT>G
5.v1_7.v1 95064886~G>A~0/1;95067213~GT>G~0/1 95064886~G>A;95067213~GT>G
5.v1_8.v1 95064886~G>C~0/1;95067213~GT>G~0/1 95064886~G>C;95067213~GT>G
5.v1_9.v1 95058414~T>C~0/1;95067213~GT>G~0/1 95058414~T>C;95067213~GT>G
6.v1_6.v1 95064931~C>T~1/1 95064931~C>T
6.v1_7.v1 95064886~G>A~0/1;95064931~C>T~0/1 95064886~G>A;95064931~C>T
6.v1_8.v1 95064886~G>C~0/1;95064931~C>T~0/1 95064886~G>C;95064931~C>T
6.v1_9.v1 95058414~T>C~0/1;95064931~C>T~0/1 95058414~T>C;95064931~C>T
7.v1_7.v1 95064886~G>A~1/1 95064886~G>A
7.v1_8.v1 95064886~G>A~0/1;95064886~G>C~0/1 95064886~G>A;95064886~G>C
7.v1_9.v1 95058414~T>C~0/1;95064886~G>A~0/1 95058414~T>C;95064886~G>A
8.v1_8.v1 95064886~G>C~1/1 95064886~G>C
8.v1_9.v1 95058414~T>C~0/1;95064886~G>C~0/1 95058414~T>C;95064886~G>C
9.v1_9.v1 95058414~T>C~1/1 95058414~T>C