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removed pgx-main

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Darren Wight
2025-08-18 12:05:31 +02:00
parent f66cd01b21
commit fcb0e9aa4c
956 changed files with 0 additions and 934400 deletions
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0
pgx-main/database/cyp1a1/b37/a_scores.dbs
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120
pgx-main/database/cyp1a1/b37/diplo_db_debugged2.dbs
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10.v1_10.v1 75012940~G>A~1/1 75012940~G>A
10.v1_11.v1 75012894~G>C~0/1;75012940~G>A~0/1 75012894~G>C;75012940~G>A
10.v1_12.v1 75012940~G>A~0/1;75015255~C>G~0/1 75012940~G>A;75015255~C>G
10.v1_13.v1 75012940~G>A~0/1;75015305~C>T~0/1 75012940~G>A;75015305~C>T
10.v1_2A.v1 75011641~A>G~0/1;75012940~G>A~0/1 75011641~A>G;75012940~G>A
10.v1_2B.v1 75011641~A>G~0/1;75012940~G>A~0/1;75012985~T>C~0/1 75011641~A>G;75012940~G>A;75012985~T>C
10.v1_2C.v1 75012940~G>A~0/1;75012985~T>C~0/1 75012940~G>A;75012985~T>C
10.v1_3.v1 75012235~A>G~0/1;75012940~G>A~0/1 75012235~A>G;75012940~G>A
10.v1_4.v1 75012940~G>A~0/1;75012987~G>T~0/1 75012940~G>A;75012987~G>T
10.v1_5.v1 75012940~G>A~0/1;75012979~G>T~0/1 75012940~G>A;75012979~G>T
10.v1_6.v1 75012940~G>A~0/1;75013804~C>T~0/1 75012940~G>A;75013804~C>T
10.v1_7.v1 75012940~G>A~0/1;75013093~C>CA~0/1 75012940~G>A;75013093~C>CA
10.v1_8.v1 75012940~G>A~0/1;75013026~A>T~0/1 75012940~G>A;75013026~A>T
10.v1_9.v1 75012940~G>A~0/1;75012979~G>A~0/1 75012940~G>A;75012979~G>A
11.v1_11.v1 75012894~G>C~1/1 75012894~G>C
11.v1_12.v1 75012894~G>C~0/1;75015255~C>G~0/1 75012894~G>C;75015255~C>G
11.v1_13.v1 75012894~G>C~0/1;75015305~C>T~0/1 75012894~G>C;75015305~C>T
11.v1_2A.v1 75011641~A>G~0/1;75012894~G>C~0/1 75011641~A>G;75012894~G>C
11.v1_2B.v1 75011641~A>G~0/1;75012894~G>C~0/1;75012985~T>C~0/1 75011641~A>G;75012894~G>C;75012985~T>C
11.v1_2C.v1 75012894~G>C~0/1;75012985~T>C~0/1 75012894~G>C;75012985~T>C
11.v1_3.v1 75012235~A>G~0/1;75012894~G>C~0/1 75012235~A>G;75012894~G>C
11.v1_4.v1 75012894~G>C~0/1;75012987~G>T~0/1 75012894~G>C;75012987~G>T
11.v1_5.v1 75012894~G>C~0/1;75012979~G>T~0/1 75012894~G>C;75012979~G>T
11.v1_6.v1 75012894~G>C~0/1;75013804~C>T~0/1 75012894~G>C;75013804~C>T
11.v1_7.v1 75012894~G>C~0/1;75013093~C>CA~0/1 75012894~G>C;75013093~C>CA
11.v1_8.v1 75012894~G>C~0/1;75013026~A>T~0/1 75012894~G>C;75013026~A>T
11.v1_9.v1 75012894~G>C~0/1;75012979~G>A~0/1 75012894~G>C;75012979~G>A
12.v1_12.v1 75015255~C>G~1/1 75015255~C>G
12.v1_13.v1 75015255~C>G~0/1;75015305~C>T~0/1 75015255~C>G;75015305~C>T
12.v1_2A.v1 75011641~A>G~0/1;75015255~C>G~0/1 75011641~A>G;75015255~C>G
12.v1_2B.v1 75011641~A>G~0/1;75012985~T>C~0/1;75015255~C>G~0/1 75011641~A>G;75012985~T>C;75015255~C>G
12.v1_2C.v1 75012985~T>C~0/1;75015255~C>G~0/1 75012985~T>C;75015255~C>G
12.v1_3.v1 75012235~A>G~0/1;75015255~C>G~0/1 75012235~A>G;75015255~C>G
12.v1_4.v1 75012987~G>T~0/1;75015255~C>G~0/1 75012987~G>T;75015255~C>G
12.v1_5.v1 75012979~G>T~0/1;75015255~C>G~0/1 75012979~G>T;75015255~C>G
12.v1_6.v1 75013804~C>T~0/1;75015255~C>G~0/1 75013804~C>T;75015255~C>G
12.v1_7.v1 75013093~C>CA~0/1;75015255~C>G~0/1 75013093~C>CA;75015255~C>G
12.v1_8.v1 75013026~A>T~0/1;75015255~C>G~0/1 75013026~A>T;75015255~C>G
12.v1_9.v1 75012979~G>A~0/1;75015255~C>G~0/1 75012979~G>A;75015255~C>G
13.v1_13.v1 75015305~C>T~1/1 75015305~C>T
13.v1_2A.v1 75011641~A>G~0/1;75015305~C>T~0/1 75011641~A>G;75015305~C>T
13.v1_2B.v1 75011641~A>G~0/1;75012985~T>C~0/1;75015305~C>T~0/1 75011641~A>G;75012985~T>C;75015305~C>T
13.v1_2C.v1 75012985~T>C~0/1;75015305~C>T~0/1 75012985~T>C;75015305~C>T
13.v1_3.v1 75012235~A>G~0/1;75015305~C>T~0/1 75012235~A>G;75015305~C>T
13.v1_4.v1 75012987~G>T~0/1;75015305~C>T~0/1 75012987~G>T;75015305~C>T
13.v1_5.v1 75012979~G>T~0/1;75015305~C>T~0/1 75012979~G>T;75015305~C>T
13.v1_6.v1 75013804~C>T~0/1;75015305~C>T~0/1 75013804~C>T;75015305~C>T
13.v1_7.v1 75013093~C>CA~0/1;75015305~C>T~0/1 75013093~C>CA;75015305~C>T
13.v1_8.v1 75013026~A>T~0/1;75015305~C>T~0/1 75013026~A>T;75015305~C>T
13.v1_9.v1 75012979~G>A~0/1;75015305~C>T~0/1 75012979~G>A;75015305~C>T
1.v1_10.v1 75012940~G>A~0/1 75012940~G>A
1.v1_11.v1 75012894~G>C~0/1 75012894~G>C
1.v1_12.v1 75015255~C>G~0/1 75015255~C>G
1.v1_13.v1 75015305~C>T~0/1 75015305~C>T
1.v1_1.v1 ref_diplo ref_diplo
1.v1_2A.v1 75011641~A>G~0/1 75011641~A>G
1.v1_2B.v1 75011641~A>G~0/1;75012985~T>C~0/1 75011641~A>G;75012985~T>C
1.v1_2C.v1 75012985~T>C~0/1 75012985~T>C
1.v1_3.v1 75012235~A>G~0/1 75012235~A>G
1.v1_4.v1 75012987~G>T~0/1 75012987~G>T
1.v1_5.v1 75012979~G>T~0/1 75012979~G>T
1.v1_6.v1 75013804~C>T~0/1 75013804~C>T
1.v1_7.v1 75013093~C>CA~0/1 75013093~C>CA
1.v1_8.v1 75013026~A>T~0/1 75013026~A>T
1.v1_9.v1 75012979~G>A~0/1 75012979~G>A
2A.v1_2A.v1 75011641~A>G~1/1 75011641~A>G
2A.v1_2B.v1 75011641~A>G~1/1;75012985~T>C~0/1 75011641~A>G;75012985~T>C
2A.v1_2C.v1 75011641~A>G~0/1;75012985~T>C~0/1 75011641~A>G;75012985~T>C
2A.v1_3.v1 75011641~A>G~0/1;75012235~A>G~0/1 75011641~A>G;75012235~A>G
2A.v1_4.v1 75011641~A>G~0/1;75012987~G>T~0/1 75011641~A>G;75012987~G>T
2A.v1_5.v1 75011641~A>G~0/1;75012979~G>T~0/1 75011641~A>G;75012979~G>T
2A.v1_6.v1 75011641~A>G~0/1;75013804~C>T~0/1 75011641~A>G;75013804~C>T
2A.v1_7.v1 75011641~A>G~0/1;75013093~C>CA~0/1 75011641~A>G;75013093~C>CA
2A.v1_8.v1 75011641~A>G~0/1;75013026~A>T~0/1 75011641~A>G;75013026~A>T
2A.v1_9.v1 75011641~A>G~0/1;75012979~G>A~0/1 75011641~A>G;75012979~G>A
2B.v1_2B.v1 75011641~A>G~1/1;75012985~T>C~1/1 75011641~A>G;75012985~T>C
2B.v1_2C.v1 75011641~A>G~0/1;75012985~T>C~1/1 75011641~A>G;75012985~T>C
2B.v1_3.v1 75011641~A>G~0/1;75012235~A>G~0/1;75012985~T>C~0/1 75011641~A>G;75012235~A>G;75012985~T>C
2B.v1_4.v1 75011641~A>G~0/1;75012985~T>C~0/1;75012987~G>T~0/1 75011641~A>G;75012985~T>C;75012987~G>T
2B.v1_5.v1 75011641~A>G~0/1;75012979~G>T~0/1;75012985~T>C~0/1 75011641~A>G;75012979~G>T;75012985~T>C
2B.v1_6.v1 75011641~A>G~0/1;75012985~T>C~0/1;75013804~C>T~0/1 75011641~A>G;75012985~T>C;75013804~C>T
2B.v1_7.v1 75011641~A>G~0/1;75012985~T>C~0/1;75013093~C>CA~0/1 75011641~A>G;75012985~T>C;75013093~C>CA
2B.v1_8.v1 75011641~A>G~0/1;75012985~T>C~0/1;75013026~A>T~0/1 75011641~A>G;75012985~T>C;75013026~A>T
2B.v1_9.v1 75011641~A>G~0/1;75012979~G>A~0/1;75012985~T>C~0/1 75011641~A>G;75012979~G>A;75012985~T>C
2C.v1_2C.v1 75012985~T>C~1/1 75012985~T>C
2C.v1_3.v1 75012235~A>G~0/1;75012985~T>C~0/1 75012235~A>G;75012985~T>C
2C.v1_4.v1 75012985~T>C~0/1;75012987~G>T~0/1 75012985~T>C;75012987~G>T
2C.v1_5.v1 75012979~G>T~0/1;75012985~T>C~0/1 75012979~G>T;75012985~T>C
2C.v1_6.v1 75012985~T>C~0/1;75013804~C>T~0/1 75012985~T>C;75013804~C>T
2C.v1_7.v1 75012985~T>C~0/1;75013093~C>CA~0/1 75012985~T>C;75013093~C>CA
2C.v1_8.v1 75012985~T>C~0/1;75013026~A>T~0/1 75012985~T>C;75013026~A>T
2C.v1_9.v1 75012979~G>A~0/1;75012985~T>C~0/1 75012979~G>A;75012985~T>C
3.v1_3.v1 75012235~A>G~1/1 75012235~A>G
3.v1_4.v1 75012235~A>G~0/1;75012987~G>T~0/1 75012235~A>G;75012987~G>T
3.v1_5.v1 75012235~A>G~0/1;75012979~G>T~0/1 75012235~A>G;75012979~G>T
3.v1_6.v1 75012235~A>G~0/1;75013804~C>T~0/1 75012235~A>G;75013804~C>T
3.v1_7.v1 75012235~A>G~0/1;75013093~C>CA~0/1 75012235~A>G;75013093~C>CA
3.v1_8.v1 75012235~A>G~0/1;75013026~A>T~0/1 75012235~A>G;75013026~A>T
3.v1_9.v1 75012235~A>G~0/1;75012979~G>A~0/1 75012235~A>G;75012979~G>A
4.v1_4.v1 75012987~G>T~1/1 75012987~G>T
4.v1_5.v1 75012979~G>T~0/1;75012987~G>T~0/1 75012979~G>T;75012987~G>T
4.v1_6.v1 75012987~G>T~0/1;75013804~C>T~0/1 75012987~G>T;75013804~C>T
4.v1_7.v1 75012987~G>T~0/1;75013093~C>CA~0/1 75012987~G>T;75013093~C>CA
4.v1_8.v1 75012987~G>T~0/1;75013026~A>T~0/1 75012987~G>T;75013026~A>T
4.v1_9.v1 75012979~G>A~0/1;75012987~G>T~0/1 75012979~G>A;75012987~G>T
5.v1_5.v1 75012979~G>T~1/1 75012979~G>T
5.v1_6.v1 75012979~G>T~0/1;75013804~C>T~0/1 75012979~G>T;75013804~C>T
5.v1_7.v1 75012979~G>T~0/1;75013093~C>CA~0/1 75012979~G>T;75013093~C>CA
5.v1_8.v1 75012979~G>T~0/1;75013026~A>T~0/1 75012979~G>T;75013026~A>T
5.v1_9.v1 75012979~G>A~0/1;75012979~G>T~0/1 75012979~G>A;75012979~G>T
6.v1_6.v1 75013804~C>T~1/1 75013804~C>T
6.v1_7.v1 75013093~C>CA~0/1;75013804~C>T~0/1 75013093~C>CA;75013804~C>T
6.v1_8.v1 75013026~A>T~0/1;75013804~C>T~0/1 75013026~A>T;75013804~C>T
6.v1_9.v1 75012979~G>A~0/1;75013804~C>T~0/1 75012979~G>A;75013804~C>T
7.v1_7.v1 75013093~C>CA~1/1 75013093~C>CA
7.v1_8.v1 75013026~A>T~0/1;75013093~C>CA~0/1 75013026~A>T;75013093~C>CA
7.v1_9.v1 75012979~G>A~0/1;75013093~C>CA~0/1 75012979~G>A;75013093~C>CA
8.v1_8.v1 75013026~A>T~1/1 75013026~A>T
8.v1_9.v1 75012979~G>A~0/1;75013026~A>T~0/1 75012979~G>A;75013026~A>T
9.v1_9.v1 75012979~G>A~1/1 75012979~G>A

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pgx-main/database/cyp1a1/b37/genotypes4.dbs
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@@ -1,2 +0,0 @@
1.v1_2B.v1 1.001_2B.001 75011641~A>G~0/1;75012985~T>C~0/1 75011641~A>G~0/1;75012985~T>C~0/1
2A.v1_2C.v1 2A.001_2C.001 75011641~A>G~0/1;75012985~T>C~0/1 75011641~A>G~0/1;75012985~T>C~0/1

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pgx-main/database/cyp1a1/b37/haps_var_new.dbs
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@@ -1,15 +0,0 @@
*10 10.v1 75012940~G>A
*11 11.v1 75012894~G>C
*12 12.v1 75015255~C>G
*13 13.v1 75015305~C>T
*1 1.v1 ref_hap
*2A 2A.v1 75011641~A>G
*2B 2B.v1 75011641~A>G;75012985~T>C
*2C 2C.v1 75012985~T>C
*3 3.v1 75012235~A>G
*4 4.v1 75012987~G>T
*5 5.v1 75012979~G>T
*6 6.v1 75013804~C>T
*7 7.v1 75013093~C>CA
*8 8.v1 75013026~A>T
*9 9.v1 75012979~G>A