8 lines
224 B
Bash
8 lines
224 B
Bash
zcat Homo_sapiens.GRCh38.115.gtf.gz \
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| awk '{if ($3 == "gene") {print $0}}' \
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| grep -E 'gene_name \"BRCA1\"|gene_name \"PALB2\"|gene_name \"CHEK2\"|gene_name \"ATM\"' \
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| gff2bed - \
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| sort -k1,1 -k2,2n \
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> test.bed
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